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Estimating cellular redundancy in networks of genetic expression
Journal article   Open access

Estimating cellular redundancy in networks of genetic expression

Raffaella Mulas and Michael J. Casey
Mathematical Biosciences, Vol.Volume 341, 108713
2021

Abstract

Eigenvalues and eigenfunctions Graph theory Additional structures Cellular redundancy Cellulars Genes expression Genetic expressions Hyper graph In networks Real coefficients Spectra's Spectral theory cell organelle estimation method experimental study laboratory method article protein expression simulation Redundancy Gene Expression Data Analysis
Networks of genetic expression can be modeled by hypergraphs with the additional structure that real coefficients are given to each vertex-edge incidence. The spectra, i.e. the multiset of the eigenvalues, of such hypergraphs, are known to encode structural information of the data. We show how these spectra can be used, in particular, in order to give an estimation of cellular redundancy, a novel measure of gene expression heterogeneity, of the network. We analyze some simulated and real data sets of gene expression for illustrating the new method proposed here. © 2021 Elsevier Inc.
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https://doi.org/10.1016/j.mbs.2021.108713View
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